RecruitingObservational

Integrated Genomics and Patient-Derived Cancer Models

NCT ID: NCT05530759Sponsor: Mayo ClinicLast updated: 2026-06-09

Summary

This study characterizes deoxyribonucleic acid (DNA) and proteomic (protein) changes in both biopsies and tumors removed during surgery of patients who have been diagnosed with aggressive/metastatic (that has spread to other places in the body) cancer in order to identify possible diagnostic markers and potential drugs for treating aggressive tumor types. Proteomic analyses include looking at the proteome, or all the proteins expressed, or made by DNA at a specific moment in time. Studying samples of blood, buccal (cheek), and tissue in the laboratory from patients undergoing surgical resection or biopsy may help doctors learn more about the changes that occur in the proteome, DNA alterations, and identify molecular biomarkers for which therapeutic drugs may exist. Studying the DNA in tumor tissue and in blood may also help researchers see if the tumor has important differences.

Detailed description

PRIMARY OBJECTIVES: I. To understand the pathogenesis, molecular mechanisms, and disease processes of malignancies. II. To examine the utility of integrated genomics for discovery of targets or pathways involved in tumor/malignancy progression of patients with malignancies. III. To observe for any evidence of anti-tumor activity from treatment if selected based on integrated genomics. IV. To create and offer opportunities for targeted individualized therapy based on the outcome of integrated genomics and micro-cancer modeling. V. To determine the outcome of patients with malignancies who received targeted individualized therapy. OUTLINE: This is an ancillary-correlative study. Patients undergo collection of blood and buccal samples before or after standard of care (SOC) biopsy or tumor resection. Patients undergo collection of tumor tissue at time of SOC biopsy or tumor resection. Patients' medical records are also reviewed. Patients' archived tissue or blood samples may also be collected.

Arms & interventions

ProcedureBiopsy Specimen
Undergo collection of tissue samples
ProcedureBiospecimen Collection
Undergo collection of blood and buccal swab samples
ProcedureArchived Biospecimen Collection
Undergo collection of archived tissue and blood samples
OtherMedical Chart Review
Review of medical record

Outcome measures

Primary

Deoxyribonucleic acid (DNA) alterations
identify molecular targets for which therapeutic drugs may exist
Time frame: Through study completion; up to five years
Proteomic changes in both biopsies and resected tumors
identify molecular targets for which therapeutic drugs may exist
Time frame: Through study completion; up to five years

Eligibility criteria

Sex: AllAge: 18 Years and olderHealthy volunteers: No

Inclusion Criteria: * Patients (or the legally authorized representative/guardian signing on behalf of the participant) must understand and provide written informed consent prior to initiation of any study-specific procedures * \>= 18 years of age * Patients must have a diagnosis of confirmed malignancy * Patient is a good medical candidate for a standard of care biopsy or surgical procedure to obtain tissue or has archival tissue available for analysis Exclusion Criteria: * Uncontrolled concurrent illness including psychiatric illness, or situations that would limit compliance with the study requirements or the ability to willingly give written informed consent * Inaccessible tumor for biopsy or patient does not have tumor tissue available for research use * Biopsy must not be considered to be more than minimal risk to the patient. Contraindications to percutaneous biopsy: * Significant coagulopathy that cannot be adequately corrected * Severely compromised cardiopulmonary function or hemodynamic instability * Lack of a safe pathway to the lesion * Inability of the patient to cooperate with, or to be positioned for, the procedure

Study locations (1)

Mayo Clinic in Rochester

Rochester, Minnesota, 55905

Recruiting

Clinical Trials Referral Office · Contact

855-776-0015 mayocliniccancerstudies@mayo.edu

Aaron S. Mansfield, M.D. · Principal Investigator